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one-color 60-mer whole human genome microarray  (Agilent technologies)


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    Structured Review

    Agilent technologies one-color 60-mer whole human genome microarray
    One Color 60 Mer Whole Human Genome Microarray, supplied by Agilent technologies, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
    https://www.bioz.com/product/one-color+60-mer+whole+human+genome+microarray/pmc03465315-118-16-17
    Average 90 stars, based on 1 article reviews
    one-color 60-mer whole human genome microarray - by Bioz Stars, 2026-10
    90/100 stars

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    Related Articles

    Labeling:

    Article Title: Cyclin-G-associated kinase modifies ?-synuclein expression levels and toxicity in Parkinson's disease: results from the GenePD Study
    Article Snippet: Two micrograms of each RNA sample were labeled and hybridized to the One-Color Agilent 60-mer Whole Human Genome Microarray at the Microarray Facility of the Whitehead Institute for Biomedical Research (Cambridge, MA, USA).

    Article Title: Postmortem Interval Influences α -Synuclein Expression in Parkinson Disease Brain
    Article Snippet: The microarray experiment was performed on the One-Color Agilent 60-mer Whole Human Genome Microarray, which contains a single 3′ UTR probe for the SNCA gene repeated 10 times on the chip.

    Article Title: Evaluation of Parkinson Disease Risk Variants as Expression-QTLs
    Article Snippet: 2 μg of each RNA sample were labeled and hybridized on the same day to the One-Color Agilent 60-mer Whole Human Genome Microarray (#G4112A) at the Agilent Microarray Facility of the Whitehead Institute for Biomedical Research (Cambridge, MA).

    Article Title: Gene Expression Profiles in Parkinson Disease Prefrontal Cortex Implicate FOXO1 and Genes under Its Transcriptional Regulation
    Article Snippet: Using the One-Color Agilent 60-mer Whole Human Genome Microarray, we investigated expression differences in the prefrontal cortex Brodmann Area 9 (BA9) in the largest PD brain study to date (27 PD and 26 control samples, E-MTAB-812 ArrayExpress dataset).

    Article Title: Gene Expression Profiles in Parkinson Disease Prefrontal Cortex Implicate FOXO1 and Genes under Its Transcriptional Regulation
    Article Snippet: 1.65 μg of each RNA sample were labeled and hybridized to the One-Color Agilent 60-mer Whole Human Genome Microarray (#G4112A) at the Agilent Microarray Facility of the Whitehead Institute for Biomedical Research (Cambridge, MA).

    Article Title: Decreased glutamic acid decarboxylase mRNA expression in prefrontal cortex in Parkinson's disease
    Article Snippet: The dye-normalized and post surrogate processed signal for the green channel, gProcessedSignal, obtained from Agilent’s Feature Extraction Software was used for downstream analyses.

    Microarray:

    Article Title: Cyclin-G-associated kinase modifies ?-synuclein expression levels and toxicity in Parkinson's disease: results from the GenePD Study
    Article Snippet: Two micrograms of each RNA sample were labeled and hybridized to the One-Color Agilent 60-mer Whole Human Genome Microarray at the Microarray Facility of the Whitehead Institute for Biomedical Research (Cambridge, MA, USA).

    Article Title: Postmortem Interval Influences α -Synuclein Expression in Parkinson Disease Brain
    Article Snippet: The microarray experiment was performed on the One-Color Agilent 60-mer Whole Human Genome Microarray, which contains a single 3′ UTR probe for the SNCA gene repeated 10 times on the chip.

    Article Title: Evaluation of Parkinson Disease Risk Variants as Expression-QTLs
    Article Snippet: 2 μg of each RNA sample were labeled and hybridized on the same day to the One-Color Agilent 60-mer Whole Human Genome Microarray (#G4112A) at the Agilent Microarray Facility of the Whitehead Institute for Biomedical Research (Cambridge, MA).

    Article Title: Gene Expression Profiles in Parkinson Disease Prefrontal Cortex Implicate FOXO1 and Genes under Its Transcriptional Regulation
    Article Snippet: Using the One-Color Agilent 60-mer Whole Human Genome Microarray, we investigated expression differences in the prefrontal cortex Brodmann Area 9 (BA9) in the largest PD brain study to date (27 PD and 26 control samples, E-MTAB-812 ArrayExpress dataset).

    Article Title: Gene Expression Profiles in Parkinson Disease Prefrontal Cortex Implicate FOXO1 and Genes under Its Transcriptional Regulation
    Article Snippet: 1.65 μg of each RNA sample were labeled and hybridized to the One-Color Agilent 60-mer Whole Human Genome Microarray (#G4112A) at the Agilent Microarray Facility of the Whitehead Institute for Biomedical Research (Cambridge, MA).

    Article Title: Decreased glutamic acid decarboxylase mRNA expression in prefrontal cortex in Parkinson's disease
    Article Snippet: The dye-normalized and post surrogate processed signal for the green channel, gProcessedSignal, obtained from Agilent’s Feature Extraction Software was used for downstream analyses.

    Expressing:

    Article Title: Cyclin-G-associated kinase modifies ?-synuclein expression levels and toxicity in Parkinson's disease: results from the GenePD Study
    Article Snippet: Two micrograms of each RNA sample were labeled and hybridized to the One-Color Agilent 60-mer Whole Human Genome Microarray at the Microarray Facility of the Whitehead Institute for Biomedical Research (Cambridge, MA, USA).

    Article Title: Postmortem Interval Influences α -Synuclein Expression in Parkinson Disease Brain
    Article Snippet: The microarray experiment was performed on the One-Color Agilent 60-mer Whole Human Genome Microarray, which contains a single 3′ UTR probe for the SNCA gene repeated 10 times on the chip.

    Article Title: Evaluation of Parkinson Disease Risk Variants as Expression-QTLs
    Article Snippet: 2 μg of each RNA sample were labeled and hybridized on the same day to the One-Color Agilent 60-mer Whole Human Genome Microarray (#G4112A) at the Agilent Microarray Facility of the Whitehead Institute for Biomedical Research (Cambridge, MA).

    Article Title: Gene Expression Profiles in Parkinson Disease Prefrontal Cortex Implicate FOXO1 and Genes under Its Transcriptional Regulation
    Article Snippet: Using the One-Color Agilent 60-mer Whole Human Genome Microarray, we investigated expression differences in the prefrontal cortex Brodmann Area 9 (BA9) in the largest PD brain study to date (27 PD and 26 control samples, E-MTAB-812 ArrayExpress dataset).

    Article Title: Gene Expression Profiles in Parkinson Disease Prefrontal Cortex Implicate FOXO1 and Genes under Its Transcriptional Regulation
    Article Snippet: 1.65 μg of each RNA sample were labeled and hybridized to the One-Color Agilent 60-mer Whole Human Genome Microarray (#G4112A) at the Agilent Microarray Facility of the Whitehead Institute for Biomedical Research (Cambridge, MA).

    Article Title: Decreased glutamic acid decarboxylase mRNA expression in prefrontal cortex in Parkinson's disease
    Article Snippet: The dye-normalized and post surrogate processed signal for the green channel, gProcessedSignal, obtained from Agilent’s Feature Extraction Software was used for downstream analyses.

    Generated:

    Article Title: Cyclin-G-associated kinase modifies ?-synuclein expression levels and toxicity in Parkinson's disease: results from the GenePD Study
    Article Snippet: Two micrograms of each RNA sample were labeled and hybridized to the One-Color Agilent 60-mer Whole Human Genome Microarray at the Microarray Facility of the Whitehead Institute for Biomedical Research (Cambridge, MA, USA).

    Article Title: Postmortem Interval Influences α -Synuclein Expression in Parkinson Disease Brain
    Article Snippet: The microarray experiment was performed on the One-Color Agilent 60-mer Whole Human Genome Microarray, which contains a single 3′ UTR probe for the SNCA gene repeated 10 times on the chip.

    Article Title: Evaluation of Parkinson Disease Risk Variants as Expression-QTLs
    Article Snippet: 2 μg of each RNA sample were labeled and hybridized on the same day to the One-Color Agilent 60-mer Whole Human Genome Microarray (#G4112A) at the Agilent Microarray Facility of the Whitehead Institute for Biomedical Research (Cambridge, MA).

    Article Title: Gene Expression Profiles in Parkinson Disease Prefrontal Cortex Implicate FOXO1 and Genes under Its Transcriptional Regulation
    Article Snippet: Using the One-Color Agilent 60-mer Whole Human Genome Microarray, we investigated expression differences in the prefrontal cortex Brodmann Area 9 (BA9) in the largest PD brain study to date (27 PD and 26 control samples, E-MTAB-812 ArrayExpress dataset).

    Article Title: Gene Expression Profiles in Parkinson Disease Prefrontal Cortex Implicate FOXO1 and Genes under Its Transcriptional Regulation
    Article Snippet: 1.65 μg of each RNA sample were labeled and hybridized to the One-Color Agilent 60-mer Whole Human Genome Microarray (#G4112A) at the Agilent Microarray Facility of the Whitehead Institute for Biomedical Research (Cambridge, MA).

    Article Title: Decreased glutamic acid decarboxylase mRNA expression in prefrontal cortex in Parkinson's disease
    Article Snippet: The dye-normalized and post surrogate processed signal for the green channel, gProcessedSignal, obtained from Agilent’s Feature Extraction Software was used for downstream analyses.



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    Agilent technologies 44 k one-color 60-mer whole human genome microarray
    Study overview. Human prefrontal cortex Brodmann Area 9 tissue was used to assess mRNA abundance levels for protein-coding genes using Illumina RNA-Seq, and protein abundance levels using MS3 proteomics in control and PD samples. Differential mRNA and protein abundance analyses were performed to identify lists of differentially abundant genes and proteins, and these top results were evaluated for functional enrichment, as well as for overlap with genes in the vicinity of significant SNPs from a recent mega-meta analysis of PD genome-wide association studies . A subset of the brain samples included in the RNA-Seq study had been previously assessed for mRNA abundance using Agilent <t>microarray</t> technology , and the results obtained with the two techniques were compared
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    Image Search Results


    Study overview. Human prefrontal cortex Brodmann Area 9 tissue was used to assess mRNA abundance levels for protein-coding genes using Illumina RNA-Seq, and protein abundance levels using MS3 proteomics in control and PD samples. Differential mRNA and protein abundance analyses were performed to identify lists of differentially abundant genes and proteins, and these top results were evaluated for functional enrichment, as well as for overlap with genes in the vicinity of significant SNPs from a recent mega-meta analysis of PD genome-wide association studies . A subset of the brain samples included in the RNA-Seq study had been previously assessed for mRNA abundance using Agilent microarray technology , and the results obtained with the two techniques were compared

    Journal: BMC Medical Genomics

    Article Title: Integrative analyses of proteomics and RNA transcriptomics implicate mitochondrial processes, protein folding pathways and GWAS loci in Parkinson disease

    doi: 10.1186/s12920-016-0164-y

    Figure Lengend Snippet: Study overview. Human prefrontal cortex Brodmann Area 9 tissue was used to assess mRNA abundance levels for protein-coding genes using Illumina RNA-Seq, and protein abundance levels using MS3 proteomics in control and PD samples. Differential mRNA and protein abundance analyses were performed to identify lists of differentially abundant genes and proteins, and these top results were evaluated for functional enrichment, as well as for overlap with genes in the vicinity of significant SNPs from a recent mega-meta analysis of PD genome-wide association studies . A subset of the brain samples included in the RNA-Seq study had been previously assessed for mRNA abundance using Agilent microarray technology , and the results obtained with the two techniques were compared

    Article Snippet: Nineteen PD and 24 control samples from the ones included in the RNA-Seq study were previously studied as part of an Agilent microarray analysis (44 K One-Color Agilent 60-mer Whole Human Genome Microarray) performed by our investigators [ ].

    Techniques: RNA Sequencing Assay, Functional Assay, GWAS, Microarray

    Summary statistics for brain samples

    Journal: BMC Medical Genomics

    Article Title: Integrative analyses of proteomics and RNA transcriptomics implicate mitochondrial processes, protein folding pathways and GWAS loci in Parkinson disease

    doi: 10.1186/s12920-016-0164-y

    Figure Lengend Snippet: Summary statistics for brain samples

    Article Snippet: Nineteen PD and 24 control samples from the ones included in the RNA-Seq study were previously studied as part of an Agilent microarray analysis (44 K One-Color Agilent 60-mer Whole Human Genome Microarray) performed by our investigators [ ].

    Techniques: Microarray